• From thursday 23/05/2019 to friday 24/05/2019 and from thursday 24/10/2019 to friday 25/10/2019

    Bioinformatics : NGS analyzes with R

    - Be able to analyze sequences coming from reads NGS
    - Knowing how to determine the mRNA differentially expressed using RNA-seq data
    - Being able to enrich the results using knowledge bases

    More details
  • From 21/05/2019 to 22/05/2019 or from 22/10/2019 to 23/10/2019

    Bioinformatics : R language - Introduction

    - Acquire the basics for the use of the R language
    - Knowing how to manipulate and visualize large sets of biological data

    More details
  • Fromi 12/06/2018 to 15/06/2018 or from 06/11/2018 to 09/11/2018

    Bioinformatics : Python for Biology

    • Be able to maintain and collaboratively develop a Python biological data analysis application
    • Know how to write simple scripts using Python
    • Managing a project collaboratively with Git
    • Know manipulate data structures
    • Understand Python modules
    • Be able to conduct bioinformatic analysis with Biopython  

    More details
  • From 14/05/2019 to 16/05/2019 or from 29/10/2019 to 31/10/2019

    Bioinformatics : Advanced sequences analysis

    • Search for informations in biological databases
    • Master sequence analysis tools such as alignments and learn how to interpret results
    • Master the strategies annotation of bacterial genomes
    • Understand the formats and the analysis of new generation sequencing data (NGS)

    More details


  • Workshops « 2 in 1 » : NGS data production and analysis

    The purpose of these workshops is to help to address the scientific projects related to sequencing comprehensively from production data analysis. They concern researchers, technical staff that students present in laboratories.

    The workshops will allow you to:

    • Knowing the specificities of different sequencing technologies and know which one is best for your needs
    • Reflecting the experimental design (number of samples, depth reading and quality sequencing)
    • Knowing the main methods for preparing libraries, their advantages and disadvantages
    • Know the elements for planning a NGS experience
    • Know the limits of analysis: What can I get according to my data? How biological question I can answer based on bioinformatics methods and characteristics of the data obtained?

    The workshops Genomics / Bioinformatics "2 in 1" deal with 4 topics:

    1. RNA-Seq, April 22, 2016: Here are the videos of the presentations.
    2. complete genome, May 3, 2016: Here are the videos of the presentations
    3. Exomes and panels of genes, September 20, 2016: Here are the videos of the presentations
    4. Metagenomics, Décember 7, 2016 : Here are the videos of the presentations


    More details