• from 09/05/2017 to 12/05/2017

    Bioinformatic : Python for Biology

    • Be able to maintain and collaboratively develop a Python biological data analysis application
    • Know how to write simple scripts using Python
    • Managing a project collaboratively with Git
    • Know manipulate data structures
    • Understand Python modules
    • Be able to conduct bioinformatic analysis with Biopython  

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  • From 29/05/2017 to 1/06/2017

    Bioinformatic : Data mining and NGS analysis with R

    • Manipulate and visualize large biological datasets
    • Analyze and align sequences from NGS reads
    • Identify differentially expressed messenger RNAs using RNA-Seq data
    • Enrich results using knowledge bases

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  • from 06/06/2017 to 08/06/2017

    Bioinformatic : Advanced sequences analysis

    • Search for informations in biological databases
    • Master sequence analysis tools such as alignments and learn how to interpret results
    • Master the strategies annotation of bacterial genomes
    • Understand the formats and the analysis of new generation sequencing data (NGS)

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  • Workshops « 2 in 1 » : NGS data production and analysis

    The purpose of these workshops is to help to address the scientific projects related to sequencing comprehensively from production data analysis. They concern researchers, technical staff that students present in laboratories.

    The workshops will allow you to:

    • Knowing the specificities of different sequencing technologies and know which one is best for your needs
    • Reflecting the experimental design (number of samples, depth reading and quality sequencing)
    • Knowing the main methods for preparing libraries, their advantages and disadvantages
    • Know the elements for planning a NGS experience
    • Know the limits of analysis: What can I get according to my data? How biological question I can answer based on bioinformatics methods and characteristics of the data obtained?

    The workshops Genomics / Bioinformatics "2 in 1" deal with 4 topics:

    1. RNA-Seq, April 22, 2016: Here are the videos of the presentations.
    2. complete genome, May 3, 2016: Here are the videos of the presentations
    3. Exomes and panels of genes, September 20, 2016: Here are the videos of the presentations
    4. Metagenomics, Décember 7, 2016 : Here are the videos of the presentations


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